PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS58430.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 185aa    MW: 20645.6 Da    PI: 7.7272
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS58430.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.22.3e-111459555
                HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                h   E++RR+r++++f  L  ++P +     +K++K ++L  A++Y+k+Lq
  EPS58430.1 14 HVLSEKKRRQRLRQRFLDLSAIVPGL-----EKMDKTSVLGGAIKYLKYLQ 59
                6778*********************9.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.973958IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-151274IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.5E-91459IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-141472IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.5E-111564IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
SNARLRQPSQ PYDHVLSEKK RRQRLRQRFL DLSAIVPGLE KMDKTSVLGG AIKYLKYLQE  60
RAKFLEEKVT NHQNTESTVR VRQTHITVTG DGEDEEEVSS VDSSLPEVVG RISDGHVLLV  120
IHCEIQKGVL ANLVKQVENL NLTVISTNVT SFGSLALDIT ILAQVEKGFA ATIEEVVRIL  180
RSTLS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011073652.14e-66PREDICTED: transcription factor bHLH18-like
TrEMBLS8BV341e-132S8BV34_9LAMI; Uncharacterized protein (Fragment)
STRINGVIT_03s0088g01240.t013e-52(Vitis vinifera)
STRINGSolyc01g106460.2.13e-52(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA17602461
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.15e-32bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]